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USC-OGP 2-DE database
Two-dimensional polyacrylamide gel electrophoresis database
USC-OGP 2-DE database
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Searching in 'USC-OGP 2-DE database' for entry
matching:
P28065
USC-OGP 2-DE database
:
P28065
P28065
General information about the entry
View entry in simple text format
Entry name
PSB9_HUMAN
Primary accession number
P28065
integrated into USC-OGP 2-DE database on
January 17, 2017 (release 1)
2D Annotations were last modified on
January 17, 2017 (version 1)
General Annotations were last modified on
April 5, 2017 (version 2)
Name and origin of the protein
Description
RecName: Full=Proteasome subunit beta type-9; EC=3.4.25.1; AltName: Full=Low molecular mass protein 2; AltName: Full=Macropain chain 7; AltName: Full=Multicatalytic endopeptidase complex chain 7; AltName: Full=Proteasome chain 7; AltName: Full=Proteasome subunit beta-1i; AltName: Full=Really interesting new gene 12 protein; Flags: Precursor;.
Gene name
Name=PSMB9
Synonyms=LMP2, PSMB6i, RING12
Annotated species
Homo sapiens (Human) [TaxID:
9606
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]
2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein
PLATELET_4-5
{PLATELET 4-5}
Homo sapiens (Human)
map experimental info
PLATELET_4-5
MAP LOCATIONS:
SPOT OGP-0214
:
pI=4.70; Mw=21495
UVEAL_MELANOMA_3-10
{UVEAL MELANOMA 3-10}
Homo sapiens (Human)
map experimental info
UVEAL_MELANOMA_3-10
MAP LOCATIONS:
SPOT OGP-1305
:
pI=4.71; Mw=22379
Cross-references
UniProtKB/Swiss-Prot
P28065; PSB9_HUMAN.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
0.0
Entry name
PSB9_HUMAN
Primary accession number
P28065
Secondary accession number(s)
B0V0T1 Q16523 Q5JNW4
Sequence was last modified on
October 1, 1993 (version 2)
Annotations were last modified on
March 15, 2017 (version 192)
Name and origin of the protein
Description
RecName: Full=Proteasome subunit beta type-9; EC=3.4.25.1; AltName: Full=Low molecular mass protein 2; AltName: Full=Macropain chain 7; AltName: Full=Multicatalytic endopeptidase complex chain 7; AltName: Full=Proteasome chain 7; AltName: Full=Proteasome subunit beta-1i; AltName: Full=Really interesting new gene 12 protein; Flags: Precursor;
Gene name
Name=PSMB9
Synonyms=LMP2, PSMB6i, RING12
Encoded on
Name=PSMB9; Synonyms=LMP2, PSMB6i, RING12
Keywords
Acetylation
;
Alternative splicing
;
Complete proteome
;
Cytoplasm
;
Host-virus interaction
;
Hydrolase
;
Immunity
;
Nucleus
;
Polymorphism
;
Protease
;
Proteasome
;
Reference proteome
;
Threonine protease
;
Zymogen
.
Copyright
Copyrighted by the UniProt Consortium, see
http://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
X66401; CAA47024.1
; -; Genomic_DNA
EMBL
X62741; CAA44603.1
; -; mRNA
EMBL
Z14977; CAA78700.1
; -; Genomic_DNA
EMBL
X87344; CAA60784.1
; -; Genomic_DNA
EMBL
U01025; AAC50154.1
; -; mRNA
EMBL
S75169; AAC60646.1
; -; mRNA
EMBL
CR541656; CAG46457.1
; -; mRNA
EMBL
AL669918; CAI18141.1
; -; Genomic_DNA
EMBL
AL935043; CAI18627.1
; -; Genomic_DNA
EMBL
BX088556; CAM26264.1
; -; Genomic_DNA
EMBL
BX927138; CAQ08450.1
; -; Genomic_DNA
EMBL
CR762476; CAQ08497.1
; -; Genomic_DNA
EMBL
CR933844; CAQ08907.1
; -; Genomic_DNA
EMBL
CR753889; CAQ10289.1
; -; Genomic_DNA
EMBL
CH471081; EAX03654.1
; -; Genomic_DNA
EMBL
BC065513; AAH65513.1
; -; mRNA
CCDS
CCDS4759.1; -. [P28065-1]
; .
PIR
A55632; A55632
; .
PIR
S27332; S27332
; .
RefSeq
NP_002791.1; NM_002800.4. [P28065-1]
; .
UniGene
Hs.654585; -
; .
ProteinModelPortal
P28065; -
; .
SMR
P28065; -
; .
BioGrid
111671; 72
; .
IntAct
P28065; 14
; .
MINT
MINT-2802096; -
; .
STRING
9606.ENSP00000363993; -
; .
BindingDB
P28065; -
; .
ChEMBL
CHEMBL1944495; -
; .
DrugBank
DB08889; Carfilzomib
; .
MEROPS
T01.013; -
; .
iPTMnet
P28065; -
; .
PhosphoSitePlus
P28065; -
; .
BioMuta
PSMB9; -
; .
DMDM
417529; -
; .
OGP
P28065; -
; .
EPD
P28065; -
; .
PaxDb
P28065; -
; .
PeptideAtlas
P28065; -
; .
PRIDE
P28065; -
; .
DNASU
5698; -
; .
Ensembl
ENST00000374859; ENSP00000363993
; ENSG00000240065. [P28065-1]; .
Ensembl
ENST00000383114; ENSP00000372595
; ENSG00000240118. [P28065-1]; .
Ensembl
ENST00000383234; ENSP00000372721
; ENSG00000243594. [P28065-1]; .
Ensembl
ENST00000422729; ENSP00000407233
; ENSG00000243067. [P28065-1]; .
Ensembl
ENST00000427870; ENSP00000412027
; ENSG00000242711; .
Ensembl
ENST00000434471; ENSP00000393744
; ENSG00000243958; .
Ensembl
ENST00000444284; ENSP00000396813
; ENSG00000239836. [P28065-1]; .
Ensembl
ENST00000453059; ENSP00000407810
; ENSG00000240508; .
GeneID
5698; -
; .
KEGG
hsa:5698; -
; .
UCSC
uc003sga.4; human. [P28065-1]
; .
CTD
5698; -
; .
DisGeNET
5698; -
; .
GeneCards
PSMB9; -
; .
H-InvDB
HIX0166929; -
; .
H-InvDB
HIX0207611; -
; .
H-InvDB
HIX0207787; -
; .
HGNC
HGNC:9546; PSMB9
; .
HPA
CAB015180; -
; .
HPA
HPA042818; -
; .
HPA
HPA053280; -
; .
MIM
177045; gene
; .
neXtProt
NX_P28065; -
; .
OpenTargets
ENSG00000240065; -
; .
PharmGKB
PA33891; -
; .
eggNOG
KOG0174; Eukaryota
; .
eggNOG
ENOG410XS23; LUCA
; .
GeneTree
ENSGT00510000046484; -
; .
HOGENOM
HOG000091079; -
; .
HOVERGEN
HBG000123; -
; .
InParanoid
P28065; -
; .
KO
K02741; -
; .
OMA
QVYGTMG; -
; .
OrthoDB
EOG091G0GUI; -
; .
PhylomeDB
P28065; -
; .
TreeFam
TF106221; -
; .
Reactome
R-HSA-1169091; Activation of NF-kappaB in B cells
; .
Reactome
R-HSA-1234176; Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha
; .
Reactome
R-HSA-1236974; ER-Phagosome pathway
; .
Reactome
R-HSA-1236978; Cross-presentation of soluble exogenous antigens (endosomes)
; .
Reactome
R-HSA-174084; Autodegradation of Cdh1 by Cdh1:APC/C
; .
Reactome
R-HSA-174113; SCF-beta-TrCP mediated degradation of Emi1
; .
Reactome
R-HSA-174154; APC/C:Cdc20 mediated degradation of Securin
; .
Reactome
R-HSA-174178; APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1
; .
Reactome
R-HSA-174184; Cdc20:Phospho-APC/C mediated degradation of Cyclin A
; .
Reactome
R-HSA-180534; Vpu mediated degradation of CD4
; .
Reactome
R-HSA-180585; Vif-mediated degradation of APOBEC3G
; .
Reactome
R-HSA-187577; SCF(Skp2)-mediated degradation of p27/p21
; .
Reactome
R-HSA-195253; Degradation of beta-catenin by the destruction complex
; .
Reactome
R-HSA-202424; Downstream TCR signaling
; .
Reactome
R-HSA-211733; Regulation of activated PAK-2p34 by proteasome mediated degradation
; .
Reactome
R-HSA-2467813; Separation of Sister Chromatids
; .
Reactome
R-HSA-2871837; FCERI mediated NF-kB activation
; .
Reactome
R-HSA-349425; Autodegradation of the E3 ubiquitin ligase COP1
; .
Reactome
R-HSA-350562; Regulation of ornithine decarboxylase (ODC)
; .
Reactome
R-HSA-382556; ABC-family proteins mediated transport
; .
Reactome
R-HSA-450408; AUF1 (hnRNP D0) binds and destabilizes mRNA
; .
Reactome
R-HSA-4608870; Asymmetric localization of PCP proteins
; .
Reactome
R-HSA-4641257; Degradation of AXIN
; .
Reactome
R-HSA-4641258; Degradation of DVL
; .
Reactome
R-HSA-5358346; Hedgehog ligand biogenesis
; .
Reactome
R-HSA-5362768; Hh mutants that don't undergo autocatalytic processing are degraded by ERAD
; .
Reactome
R-HSA-5607761; Dectin-1 mediated noncanonical NF-kB signaling
; .
Reactome
R-HSA-5607764; CLEC7A (Dectin-1) signaling
; .
Reactome
R-HSA-5610780; Degradation of GLI1 by the proteasome
; .
Reactome
R-HSA-5610783; Degradation of GLI2 by the proteasome
; .
Reactome
R-HSA-5610785; GLI3 is processed to GLI3R by the proteasome
; .
Reactome
R-HSA-5632684; Hedgehog 'on' state
; .
Reactome
R-HSA-5658442; Regulation of RAS by GAPs
; .
Reactome
R-HSA-5668541; TNFR2 non-canonical NF-kB pathway
; .
Reactome
R-HSA-5676590; NIK-->noncanonical NF-kB signaling
; .
Reactome
R-HSA-5678895; Defective CFTR causes cystic fibrosis
; .
Reactome
R-HSA-5687128; MAPK6/MAPK4 signaling
; .
Reactome
R-HSA-5689603; UCH proteinases
; .
Reactome
R-HSA-5689880; Ub-specific processing proteases
; .
Reactome
R-HSA-68827; CDT1 association with the CDC6:ORC:origin complex
; .
Reactome
R-HSA-68949; Orc1 removal from chromatin
; .
Reactome
R-HSA-69017; CDK-mediated phosphorylation and removal of Cdc6
; .
Reactome
R-HSA-69229; Ubiquitin-dependent degradation of Cyclin D1
; .
Reactome
R-HSA-69481; G2/M Checkpoints
; .
Reactome
R-HSA-69601; Ubiquitin Mediated Degradation of Phosphorylated Cdc25A
; .
Reactome
R-HSA-8852276; The role of GTSE1 in G2/M progression after G2 checkpoint
; .
Reactome
R-HSA-8854050; FBXL7 down-regulates AURKA during mitotic entry and in early mitosis
; .
Reactome
R-HSA-983168; Antigen processing: Ubiquitination & Proteasome degradation
; .
GeneWiki
PSMB9; -
; .
GenomeRNAi
5698; -
; .
PRO
PR:P28065; -
; .
Proteomes
UP000005640; Chromosome 6
; .
Bgee
ENSG00000239836; -
; .
CleanEx
HS_PSMB9; -
; .
ExpressionAtlas
P28065; baseline and differential
; .
Genevisible
P28065; HS
; .
GO
GO:0005829; C:cytosol
; IDA:HPA; .
GO
GO:0070062; C:extracellular exosome
; IDA:UniProtKB; .
GO
GO:0005654; C:nucleoplasm
; TAS:Reactome; .
GO
GO:0000502; C:proteasome complex
; TAS:ProtInc; .
GO
GO:0005839; C:proteasome core complex
; ISS:UniProtKB; .
GO
GO:1990111; C:spermatoproteasome complex
; ISS:UniProtKB; .
GO
GO:0004298; F:threonine-type endopeptidase activity
; IEA:UniProtKB-KW; .
GO
GO:0031145; P:anaphase-promoting complex-dependent catabolic process
; TAS:Reactome; .
GO
GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I
; TAP-dependent; TAS:Reactome
GO
GO:0038095; P:Fc-epsilon receptor signaling pathway
; TAS:Reactome; .
GO
GO:0000165; P:MAPK cascade
; TAS:Reactome; .
GO
GO:0090090; P:negative regulation of canonical Wnt signaling pathway
; TAS:Reactome; .
GO
GO:0010972; P:negative regulation of G2/M transition of mitotic cell cycle
; TAS:Reactome; .
GO
GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
; TAS:Reactome; .
GO
GO:0038061; P:NIK/NF-kappaB signaling
; TAS:Reactome; .
GO
GO:0090263; P:positive regulation of canonical Wnt signaling pathway
; TAS:Reactome; .
GO
GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
; TAS:Reactome; .
GO
GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process
; TAS:Reactome; .
GO
GO:0016579; P:protein deubiquitination
; TAS:Reactome; .
GO
GO:0000209; P:protein polyubiquitination
; TAS:Reactome; .
GO
GO:0006521; P:regulation of cellular amino acid metabolic process
; TAS:Reactome; .
GO
GO:2000116; P:regulation of cysteine-type endopeptidase activity
; IMP:UniProtKB; .
GO
GO:0043488; P:regulation of mRNA stability
; TAS:Reactome; .
GO
GO:0061418; P:regulation of transcription from RNA polymerase II promoter in response to hypoxia
; TAS:Reactome; .
GO
GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
; TAS:Reactome; .
GO
GO:0002223; P:stimulatory C-type lectin receptor signaling pathway
; TAS:Reactome; .
GO
GO:0050852; P:T cell receptor signaling pathway
; TAS:Reactome; .
GO
GO:0055085; P:transmembrane transport
; TAS:Reactome; .
GO
GO:0033209; P:tumor necrosis factor-mediated signaling pathway
; TAS:Reactome; .
GO
GO:0016032; P:viral process
; IEA:UniProtKB-KW; .
GO
GO:0060071; P:Wnt signaling pathway
; planar cell polarity pathway; TAS:Reactome
Gene3D
3.60.20.10; -
; 1; .
InterPro
IPR029055; Ntn_hydrolases_N
; .
InterPro
IPR000243; Pept_T1A_subB
; .
InterPro
IPR016050; Proteasome_bsu_CS
; .
InterPro
IPR001353; Proteasome_sua/b
; .
InterPro
IPR023333; Proteasome_suB-type
; .
Pfam
PF00227; Proteasome
; 1; .
PRINTS
PR00141; PROTEASOME
; .
SUPFAM
SSF56235; SSF56235
; 1; .
PROSITE
PS00854; PROTEASOME_BETA_1
; 1; .
PROSITE
PS51476; PROTEASOME_BETA_2
; 1; .
Gateways to other related servers
The World-2DPAGE Constellation
- Entry point to the world-wide 2-DPAGE resources.
World-2DPAGE Repository
- A public repository for gel-based proteomics data linked to protein identification published in the literature.
World-2DPAGE Portal
- A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
SWISS-2DPAGE
- The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
ExPASy
- The resources web server of the
Swiss Institute of Bioinformatics
Database constructed and maintained by
Angel Garcia
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server
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